Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TPM3P06753 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TPM3P06753 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM3P06753 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.6■□□□□ 0.25
TPM3P06753 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 YBX1P5-201ENST00000509441 847 ntBASIC16.6■□□□□ 0.25
TPM3P06753 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 TIMM17BP1-201ENST00000545713 516 ntBASIC16.6■□□□□ 0.25
TPM3P06753 AC051619.7-201ENST00000568314 623 ntBASIC16.6■□□□□ 0.25
TPM3P06753 MIR4469-201ENST00000583919 79 ntBASIC16.6■□□□□ 0.25
TPM3P06753 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.6■□□□□ 0.25
TPM3P06753 AL109936.8-201ENST00000641772 604 ntBASIC16.6■□□□□ 0.25
TPM3P06753 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 AC090643.2-201ENST00000623442 2029 ntBASIC16.6■□□□□ 0.25
TPM3P06753 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TPM3P06753 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM3P06753 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TPM3P06753 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.59■□□□□ 0.25
TPM3P06753 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.59■□□□□ 0.25
TPM3P06753 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.59■□□□□ 0.25
TPM3P06753 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 AC111170.3-201ENST00000624282 2464 ntBASIC16.59■□□□□ 0.25
TPM3P06753 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.59■□□□□ 0.25
TPM3P06753 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 CICP16-201ENST00000502609 2813 ntBASIC16.59■□□□□ 0.25
TPM3P06753 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.59■□□□□ 0.25
TPM3P06753 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 AL512356.2-201ENST00000546955 174 ntBASIC16.59■□□□□ 0.25
TPM3P06753 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.59■□□□□ 0.25
TPM3P06753 AL512361.1-201ENST00000554200 418 ntBASIC16.59■□□□□ 0.25
TPM3P06753 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms