Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 FAM90A21P-201ENST00000510875 1396 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A15P-201ENST00000514465 1395 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A6P-201ENST00000515148 1394 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A16P-201ENST00000526662 1395 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A9P-201ENST00000527940 1395 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A5P-201ENST00000528738 1395 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A14P-201ENST00000530386 1395 ntBASIC15.41■□□□□ 0.06
RB1P06400 FAM90A13P-201ENST00000534703 1395 ntBASIC15.41■□□□□ 0.06
RB1P06400 AC068587.6-202ENST00000641839 5619 ntBASIC15.41■□□□□ 0.06
RB1P06400 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RB1P06400 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.41■□□□□ 0.06
RB1P06400 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RB1P06400 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 RN7SL396P-201ENST00000471086 295 ntBASIC15.41■□□□□ 0.06
RB1P06400 RN7SL23P-201ENST00000484055 275 ntBASIC15.41■□□□□ 0.06
RB1P06400 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.41■□□□□ 0.06
RB1P06400 AC026410.1-201ENST00000507366 1101 ntBASIC15.41■□□□□ 0.06
RB1P06400 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 AC068867.1-201ENST00000559855 150 ntBASIC15.41■□□□□ 0.06
RB1P06400 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 AC011471.3-201ENST00000623576 402 ntBASIC15.41■□□□□ 0.06
RB1P06400 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RB1P06400 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RB1P06400 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RB1P06400 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.4■□□□□ 0.06
RB1P06400 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
RB1P06400 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.4■□□□□ 0.06
RB1P06400 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.4■□□□□ 0.06
RB1P06400 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RB1P06400 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.4■□□□□ 0.06
RB1P06400 AL135901.1-201ENST00000451812 333 ntBASIC15.4■□□□□ 0.06
RB1P06400 AC012158.2-201ENST00000536546 354 ntBASIC15.4■□□□□ 0.06
RB1P06400 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 AC002044.2-201ENST00000624910 970 ntBASIC15.4■□□□□ 0.06
RB1P06400 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.4■□□□□ 0.06
RB1P06400 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.4■□□□□ 0.06
RB1P06400 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RB1P06400 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.4■□□□□ 0.06
RB1P06400 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms