Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 FOXO1B-201ENST00000504678 1527 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 CICP16-201ENST00000502609 2813 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 VN2R19P-201ENST00000442399 1052 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 AC108751.1-201ENST00000490852 363 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 SLED1-202ENST00000512051 380 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 AL138918.1-201ENST00000568306 659 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.72□□□□□ -0.53
IFNA1P01562 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 MIR6074-201ENST00000612054 107 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 REXO1L6P-202ENST00000619970 1078 ntBASIC11.72□□□□□ -0.53
IFNA1P01562 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.53
IFNA1P01562 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
IFNA1P01562 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.72□□□□□ -0.53
IFNA1P01562 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IFNA1P01562 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IFNA1P01562 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 DLX4-206ENST00000611342 1662 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 AP002414.3-201ENST00000589352 1468 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 AC024075.2-201ENST00000598112 1473 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
IFNA1P01562 AC092123.2-201ENST00000611189 5421 ntBASIC11.71□□□□□ -0.53
IFNA1P01562 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IFNA1P01562 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.71□□□□□ -0.53
IFNA1P01562 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms