Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.62■□□□□ 0.09
TIMP1P01033 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.62■□□□□ 0.09
TIMP1P01033 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.62■□□□□ 0.09
TIMP1P01033 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.62■□□□□ 0.09
TIMP1P01033 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TIMP1P01033 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.62■□□□□ 0.09
TIMP1P01033 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 LINC00528-201ENST00000600723 2160 ntBASIC15.62■□□□□ 0.09
TIMP1P01033 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TIMP1P01033 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.62■□□□□ 0.09
TIMP1P01033 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
TIMP1P01033 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 OR7E115P-201ENST00000382617 1024 ntBASIC15.61■□□□□ 0.09
TIMP1P01033 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 RPL3P5-201ENST00000441645 1232 ntBASIC15.61■□□□□ 0.09
TIMP1P01033 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.61■□□□□ 0.09
TIMP1P01033 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.61■□□□□ 0.09
TIMP1P01033 RN7SL788P-201ENST00000460504 316 ntBASIC15.61■□□□□ 0.09
TIMP1P01033 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TIMP1P01033 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.61■□□□□ 0.09
TIMP1P01033 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.61■□□□□ 0.09
TIMP1P01033 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
TIMP1P01033 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.61■□□□□ 0.09
TIMP1P01033 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.61■□□□□ 0.09
TIMP1P01033 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.61■□□□□ 0.09
TIMP1P01033 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.61■□□□□ 0.09
TIMP1P01033 AP000769.1-203ENST00000637245 208 ntBASIC15.61■□□□□ 0.09
TIMP1P01033 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.61■□□□□ 0.09
TIMP1P01033 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TIMP1P01033 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.61■□□□□ 0.09
TIMP1P01033 AL391005.1-201ENST00000623953 2435 ntBASIC15.6■□□□□ 0.09
TIMP1P01033 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.6■□□□□ 0.09
TIMP1P01033 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TIMP1P01033 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.6■□□□□ 0.09
TIMP1P01033 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 NHP2P1-201ENST00000335274 462 ntBASIC15.6■□□□□ 0.09
TIMP1P01033 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 BX679664.3-201ENST00000414070 555 ntBASIC15.6■□□□□ 0.09
TIMP1P01033 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.6■□□□□ 0.09
TIMP1P01033 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TIMP1P01033 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 ASS1P2-201ENST00000439895 1223 ntBASIC15.6■□□□□ 0.09
TIMP1P01033 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TIMP1P01033 AC113935.1-201ENST00000471722 555 ntBASIC15.6■□□□□ 0.09
TIMP1P01033 KLF17P1-201ENST00000547105 1126 ntBASIC15.6■□□□□ 0.09
TIMP1P01033 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.6■□□□□ 0.09
TIMP1P01033 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TIMP1P01033 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TIMP1P01033 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TIMP1P01033 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TIMP1P01033 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP1P01033 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.59■□□□□ 0.09
TIMP1P01033 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms