Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.19□□□□□ -0.3
CNOT4O95628 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.19□□□□□ -0.3
CNOT4O95628 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.19□□□□□ -0.3
CNOT4O95628 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.19□□□□□ -0.3
CNOT4O95628 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.19□□□□□ -0.3
CNOT4O95628 AC004466.1-201ENST00000599515 1080 ntBASIC13.19□□□□□ -0.3
CNOT4O95628 AC073413.1-201ENST00000603927 732 ntBASIC13.19□□□□□ -0.3
CNOT4O95628 AL022328.3-201ENST00000607943 679 ntBASIC13.19□□□□□ -0.3
CNOT4O95628 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CNOT4O95628 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CNOT4O95628 AC023090.2-201ENST00000625182 2110 ntBASIC13.19□□□□□ -0.3
CNOT4O95628 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CNOT4O95628 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CNOT4O95628 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.19□□□□□ -0.3
CNOT4O95628 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.19□□□□□ -0.3
CNOT4O95628 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CNOT4O95628 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 AL359258.3-201ENST00000622910 2331 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CNOT4O95628 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 PTENP1-202ENST00000532280 3996 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 AC003102.2-201ENST00000589195 1469 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CNOT4O95628 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.18□□□□□ -0.3
CNOT4O95628 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 AP001258.2-201ENST00000529891 490 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.18□□□□□ -0.3
CNOT4O95628 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 PPY2P-201ENST00000582808 702 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms