Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 PCDHGB8P-201ENST00000502926 1973 ntBASIC21.46■■□□□ 1.03
RAPGEF3O95398 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 HLF-202ENST00000430986 1385 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RAPGEF3O95398 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 PCDHA1-201ENST00000378133 2726 ntBASIC21.45■■□□□ 1.02
RAPGEF3O95398 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 AP000920.1-201ENST00000531824 344 ntBASIC21.45■■□□□ 1.02
RAPGEF3O95398 BAK1P2-201ENST00000532665 631 ntBASIC21.45■■□□□ 1.02
RAPGEF3O95398 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC21.45■■□□□ 1.02
RAPGEF3O95398 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 AC117503.4-201ENST00000623229 1418 ntBASIC21.45■■□□□ 1.02
RAPGEF3O95398 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF3O95398 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 CASP2-203ENST00000392925 616 ntTSL 3 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 OLA1P2-201ENST00000395519 1264 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 CDK4P1-201ENST00000454213 828 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 ALG1L15P-201ENST00000482834 794 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 AC147876.1-201ENST00000504408 322 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 AC004801.1-201ENST00000549557 360 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 BX322534.1-201ENST00000635574 241 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 AC215524.1-201ENST00000635696 241 ntBASIC21.44■■□□□ 1.02
RAPGEF3O95398 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF3O95398 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RAPGEF3O95398 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 AC020658.6-201ENST00000623564 1870 ntBASIC21.43■■□□□ 1.02
RAPGEF3O95398 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 SIRPB3P-201ENST00000340424 1216 ntBASIC21.43■■□□□ 1.02
RAPGEF3O95398 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 AC073210.1-201ENST00000414799 232 ntBASIC21.43■■□□□ 1.02
RAPGEF3O95398 AL137244.1-201ENST00000422931 865 ntBASIC21.43■■□□□ 1.02
RAPGEF3O95398 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF3O95398 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 MAX-218ENST00000557746 571 ntTSL 4 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC21.43■■□□□ 1.02
RAPGEF3O95398 AC005746.3-201ENST00000614751 393 ntBASIC21.43■■□□□ 1.02
RAPGEF3O95398 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms