Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.23□□□□□ -0.29
CDRT1O95170 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 AP000344.2-201ENST00000512987 629 ntBASIC13.23□□□□□ -0.29
CDRT1O95170 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.23□□□□□ -0.29
CDRT1O95170 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.23□□□□□ -0.29
CDRT1O95170 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.23□□□□□ -0.29
CDRT1O95170 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 MIR6069-201ENST00000620069 79 ntBASIC13.23□□□□□ -0.29
CDRT1O95170 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.23□□□□□ -0.29
CDRT1O95170 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.23□□□□□ -0.29
CDRT1O95170 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDRT1O95170 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 BEND3P3-201ENST00000611030 2440 ntBASIC13.22□□□□□ -0.29
CDRT1O95170 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 AC010327.4-202ENST00000591484 748 ntBASIC13.22□□□□□ -0.29
CDRT1O95170 AC009093.7-201ENST00000623853 1223 ntBASIC13.22□□□□□ -0.29
CDRT1O95170 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.22□□□□□ -0.29
CDRT1O95170 AF228730.6-201ENST00000641497 218 ntBASIC13.22□□□□□ -0.29
CDRT1O95170 AC084121.3-201ENST00000641716 218 ntBASIC13.22□□□□□ -0.29
CDRT1O95170 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.22□□□□□ -0.29
CDRT1O95170 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.22□□□□□ -0.29
CDRT1O95170 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDRT1O95170 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms