Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.94■□□□□ 0.62
LTN1O94822 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 AC021305.1-201ENST00000520656 1514 ntBASIC18.94■□□□□ 0.62
LTN1O94822 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.94■□□□□ 0.62
LTN1O94822 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 USP17L6P-201ENST00000382470 1197 ntBASIC18.93■□□□□ 0.62
LTN1O94822 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.93■□□□□ 0.62
LTN1O94822 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18.93■□□□□ 0.62
LTN1O94822 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 AL031673.1-201ENST00000611460 466 ntBASIC18.93■□□□□ 0.62
LTN1O94822 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.93■□□□□ 0.62
LTN1O94822 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 AC104640.1-201ENST00000562617 2109 ntBASIC18.93■□□□□ 0.62
LTN1O94822 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 AC103592.1-201ENST00000394513 664 ntBASIC18.93■□□□□ 0.62
LTN1O94822 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.93■□□□□ 0.62
LTN1O94822 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 KRT18P37-201ENST00000520711 1282 ntBASIC18.93■□□□□ 0.62
LTN1O94822 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.93■□□□□ 0.62
LTN1O94822 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.93■□□□□ 0.62
LTN1O94822 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.93■□□□□ 0.62
LTN1O94822 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LTN1O94822 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.93■□□□□ 0.62
LTN1O94822 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.92■□□□□ 0.62
LTN1O94822 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.92■□□□□ 0.62
LTN1O94822 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 AL139158.3-201ENST00000641212 1562 ntBASIC18.92■□□□□ 0.62
LTN1O94822 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LTN1O94822 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.92■□□□□ 0.62
LTN1O94822 AC055811.3-201ENST00000584952 686 ntBASIC18.92■□□□□ 0.62
LTN1O94822 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LTN1O94822 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.92■□□□□ 0.62
LTN1O94822 FGD5P1-202ENST00000614866 2498 ntBASIC18.92■□□□□ 0.62
LTN1O94822 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LTN1O94822 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.92■□□□□ 0.62
LTN1O94822 HYMAI-201ENST00000635591 3347 ntBASIC18.91■□□□□ 0.62
LTN1O94822 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LTN1O94822 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LTN1O94822 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LTN1O94822 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LTN1O94822 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LTN1O94822 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LTN1O94822 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.91■□□□□ 0.62
LTN1O94822 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.91■□□□□ 0.62
LTN1O94822 AL512599.1-201ENST00000430724 685 ntBASIC18.91■□□□□ 0.62
LTN1O94822 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.91■□□□□ 0.62
LTN1O94822 RN7SL494P-201ENST00000461517 304 ntBASIC18.91■□□□□ 0.62
LTN1O94822 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LTN1O94822 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
LTN1O94822 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
LTN1O94822 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.91■□□□□ 0.62
LTN1O94822 AC015909.5-201ENST00000624336 2266 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms