Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 SCARNA12-201ENST00000459155 270 ntBASIC16.47■□□□□ 0.23
TRIM17Q9Y577 RN7SL288P-201ENST00000490496 291 ntBASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AC013553.1-201ENST00000560906 267 ntBASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AC124068.2-201ENST00000569473 1109 ntBASIC16.47■□□□□ 0.23
TRIM17Q9Y577 AC011462.4-201ENST00000616866 449 ntBASIC16.47■□□□□ 0.23
TRIM17Q9Y577 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM17Q9Y577 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 CHCHD2P2-201ENST00000503744 321 ntBASIC16.46■□□□□ 0.23
TRIM17Q9Y577 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 FUCA1P1-201ENST00000374476 1351 ntBASIC16.46■□□□□ 0.23
TRIM17Q9Y577 WASH7P-201ENST00000488147 1351 ntBASIC16.46■□□□□ 0.23
TRIM17Q9Y577 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 AP002353.1-201ENST00000528257 1599 ntBASIC16.46■□□□□ 0.23
TRIM17Q9Y577 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM17Q9Y577 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM17Q9Y577 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM17Q9Y577 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.46■□□□□ 0.22
TRIM17Q9Y577 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM17Q9Y577 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM17Q9Y577 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms