Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 AP005264.6-204ENST00000588436 719 ntBASIC19.69■□□□□ 0.74
PHF8Q9UPP1 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 AC008894.3-201ENST00000624324 3103 ntBASIC19.68■□□□□ 0.74
PHF8Q9UPP1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 PPP1R2P4-201ENST00000424051 595 ntBASIC19.68■□□□□ 0.74
PHF8Q9UPP1 RN7SL582P-201ENST00000491078 279 ntBASIC19.68■□□□□ 0.74
PHF8Q9UPP1 RN7SL767P-201ENST00000493013 295 ntBASIC19.68■□□□□ 0.74
PHF8Q9UPP1 KRT8P2-201ENST00000556193 944 ntBASIC19.68■□□□□ 0.74
PHF8Q9UPP1 AC010632.2-201ENST00000588369 1224 ntBASIC19.68■□□□□ 0.74
PHF8Q9UPP1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.68■□□□□ 0.74
PHF8Q9UPP1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 MIR566-201ENST00000385187 94 ntBASIC19.67■□□□□ 0.74
PHF8Q9UPP1 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 KRT18P46-201ENST00000435568 1279 ntBASIC19.67■□□□□ 0.74
PHF8Q9UPP1 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AP005212.2-201ENST00000584979 510 ntBASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC006548.2-201ENST00000605217 529 ntBASIC19.67■□□□□ 0.74
PHF8Q9UPP1 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 AC006483.2-201ENST00000609813 515 ntBASIC19.67■□□□□ 0.74
PHF8Q9UPP1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF8Q9UPP1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms