Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 LINC00528-201ENST00000600723 2160 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AHCYP4-201ENST00000419201 1315 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AL583805.1-201ENST00000391389 531 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 RPS9P1-201ENST00000419943 583 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AP000358.1-201ENST00000456260 156 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AC003686.1-201ENST00000550956 1034 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AC135983.4-201ENST00000564116 1262 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 SIGLEC18P-201ENST00000602271 909 ntBASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DNMT3BQ9UBC3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 RNA5SP359-201ENST00000364838 113 ntBASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 AL512430.1-201ENST00000392575 860 ntBASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 RPSAP15-201ENST00000448168 861 ntBASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 AP002803.1-201ENST00000528836 498 ntBASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 AC092135.3-201ENST00000624151 1846 ntBASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DNMT3BQ9UBC3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DNMT3BQ9UBC3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DNMT3BQ9UBC3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DNMT3BQ9UBC3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms