Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CDC42SE1Q9NRR8 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CTAGE10P-201ENST00000318353 2408 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 NRG1-212ENST00000521670 1769 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 LINC02204-201ENST00000630447 3206 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 TWNK-202ENST00000370228 3175 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KCTD21-AS1-207ENST00000600795 1549 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AL008628.1-201ENST00000564198 5187 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KIAA0040-203ENST00000545251 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC113404.2-201ENST00000507884 177 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC112698.1-201ENST00000510299 916 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC103834.1-201ENST00000520383 144 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 C1QL1P1-201ENST00000568105 661 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC005829.2-201ENST00000571422 1056 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KLK2-203ENST00000391810 2674 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 SPDYE5-202ENST00000624640 2667 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC7.33□□□□□ -1.24
CDC42SE1Q9NRR8 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms