Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4Q9NQC3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AC010536.1-201ENST00000538868 2611 ntBASIC17.69■□□□□ 0.42
RTN4Q9NQC3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AP002761.4-201ENST00000565433 3361 ntBASIC17.69■□□□□ 0.42
RTN4Q9NQC3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 CRYGEP-201ENST00000412192 528 ntBASIC17.69■□□□□ 0.42
RTN4Q9NQC3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AL512637.1-201ENST00000439523 1231 ntBASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AC010507.1-201ENST00000633895 436 ntBASIC17.69■□□□□ 0.42
RTN4Q9NQC3 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 MEIS2-206ENST00000424352 2917 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 AP001282.1-201ENST00000531301 1499 ntBASIC17.69■□□□□ 0.42
RTN4Q9NQC3 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4Q9NQC3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 KRT18P56-201ENST00000507275 550 ntBASIC17.68■□□□□ 0.42
RTN4Q9NQC3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN4Q9NQC3 EIF4EP5-201ENST00000528228 640 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms