Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.84■□□□□ 0.61
ABCA3Q99758 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA3Q99758 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ABCA3Q99758 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA3Q99758 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA3Q99758 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA3Q99758 GGTLC4P-201ENST00000402176 664 ntBASIC18.83■□□□□ 0.61
ABCA3Q99758 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC18.83■□□□□ 0.61
ABCA3Q99758 HNRNPA1P10-201ENST00000444945 962 ntBASIC18.83■□□□□ 0.61
ABCA3Q99758 ALG1L15P-201ENST00000482834 794 ntBASIC18.83■□□□□ 0.61
ABCA3Q99758 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC18.83■□□□□ 0.61
ABCA3Q99758 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC18.83■□□□□ 0.61
ABCA3Q99758 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.83■□□□□ 0.61
ABCA3Q99758 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.83■□□□□ 0.61
ABCA3Q99758 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ABCA3Q99758 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCA3Q99758 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
ABCA3Q99758 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCA3Q99758 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ABCA3Q99758 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ABCA3Q99758 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 AC103592.1-201ENST00000394513 664 ntBASIC18.83■□□□□ 0.6
ABCA3Q99758 MAGEA7P-201ENST00000436482 942 ntBASIC18.83■□□□□ 0.6
ABCA3Q99758 GOLGA2P8-201ENST00000505201 779 ntBASIC18.83■□□□□ 0.6
ABCA3Q99758 CSTP2-201ENST00000610599 398 ntBASIC18.83■□□□□ 0.6
ABCA3Q99758 MIR6893-201ENST00000613458 69 ntBASIC18.83■□□□□ 0.6
ABCA3Q99758 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA3Q99758 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC18.83■□□□□ 0.6
ABCA3Q99758 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCA3Q99758 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ABCA3Q99758 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCA3Q99758 Z98885.3-201ENST00000624882 1757 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCA3Q99758 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC18.82■□□□□ 0.6
ABCA3Q99758 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 KRT18P33-201ENST00000398525 1043 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC18.82■□□□□ 0.6
ABCA3Q99758 PGK1P2-201ENST00000431702 1214 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 RPSAP12-201ENST00000435879 888 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 AC006328.1-201ENST00000437571 379 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 PSME2P2-201ENST00000453033 700 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCA3Q99758 AC108724.1-201ENST00000481669 352 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 AC022447.6-201ENST00000515522 438 ntBASIC18.82■□□□□ 0.6
ABCA3Q99758 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ABCA3Q99758 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCA3Q99758 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA3Q99758 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA3Q99758 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ABCA3Q99758 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 HNRNPA1P25-201ENST00000422644 937 ntBASIC18.81■□□□□ 0.6
ABCA3Q99758 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.81■□□□□ 0.6
ABCA3Q99758 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA3Q99758 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCA3Q99758 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCA3Q99758 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.81■□□□□ 0.6
ABCA3Q99758 AC123912.6-201ENST00000612657 315 ntBASIC18.81■□□□□ 0.6
ABCA3Q99758 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC18.81■□□□□ 0.6
ABCA3Q99758 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA3Q99758 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA3Q99758 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCA3Q99758 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 AC215219.1-201ENST00000400706 1817 ntBASIC18.81■□□□□ 0.6
ABCA3Q99758 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA3Q99758 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA3Q99758 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA3Q99758 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ABCA3Q99758 PES1P2-201ENST00000449745 1735 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms