Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HAPLN3Q96S86 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AC006504.5-208ENST00000588784 2401 ntBASIC15.27■□□□□ 0.04
HAPLN3Q96S86 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 RPL13AP20-201ENST00000459725 609 ntBASIC15.27■□□□□ 0.04
HAPLN3Q96S86 MYADML-201ENST00000474610 2147 ntBASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.27■□□□□ 0.04
HAPLN3Q96S86 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HAPLN3Q96S86 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.26■□□□□ 0.03
HAPLN3Q96S86 AL354877.1-201ENST00000424412 413 ntBASIC15.26■□□□□ 0.03
HAPLN3Q96S86 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 RPSAP36-202ENST00000494591 1261 ntBASIC15.26■□□□□ 0.03
HAPLN3Q96S86 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 FAM86HP-204ENST00000513466 959 ntBASIC15.26■□□□□ 0.03
HAPLN3Q96S86 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 AC009955.4-201ENST00000597192 544 ntBASIC15.26■□□□□ 0.03
HAPLN3Q96S86 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HAPLN3Q96S86 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms