Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 AC239868.1-201ENST00000369385 493 ntBASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 FGFR3P1-201ENST00000449999 601 ntBASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 MIR4754-201ENST00000582477 89 ntBASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 U62317.3-201ENST00000608319 855 ntBASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 AL161772.1-201ENST00000610494 4412 ntBASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC85AQ96PX6 TBC1D3J-201ENST00000620719 1426 ntBASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 CAP2P1-201ENST00000557743 1390 ntBASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 AC128714.1-201ENST00000637035 887 ntBASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 LINC01165-201ENST00000445190 1623 ntBASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC85AQ96PX6 AC023157.3-201ENST00000619086 2088 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 RPL8P2-201ENST00000430538 502 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AL353637.1-201ENST00000451571 732 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 MPRIPP1-201ENST00000452433 1089 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 TMEM198B-204ENST00000484016 896 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 MIR4722-201ENST00000578292 60 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AL353726.2-201ENST00000623259 884 ntBASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC85AQ96PX6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms