Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 AL132994.2-201ENST00000603120 687 ntBASIC17.28■□□□□ 0.36
TRIM47Q96LD4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 AP000593.2-201ENST00000542775 1433 ntBASIC17.28■□□□□ 0.36
TRIM47Q96LD4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM47Q96LD4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 FKBP4P6-201ENST00000457486 1332 ntBASIC17.27■□□□□ 0.36
TRIM47Q96LD4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.27■□□□□ 0.36
TRIM47Q96LD4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 AP001065.2-201ENST00000617205 644 ntBASIC17.27■□□□□ 0.36
TRIM47Q96LD4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 NAP1L6-202ENST00000641404 1222 ntBASIC17.27■□□□□ 0.36
TRIM47Q96LD4 LINC00528-201ENST00000600723 2160 ntBASIC17.27■□□□□ 0.36
TRIM47Q96LD4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM47Q96LD4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 TBC1D3J-201ENST00000620719 1426 ntBASIC17.27■□□□□ 0.35
TRIM47Q96LD4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 OR2I1P-210ENST00000642037 4691 ntBASIC17.27■□□□□ 0.35
TRIM47Q96LD4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TRIM47Q96LD4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 RPL5P21-201ENST00000404620 815 ntBASIC17.26■□□□□ 0.35
TRIM47Q96LD4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 AC132192.2-201ENST00000596206 1147 ntBASIC17.26■□□□□ 0.35
TRIM47Q96LD4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 YRDCP1-201ENST00000621419 643 ntBASIC17.26■□□□□ 0.35
TRIM47Q96LD4 AC009084.3-201ENST00000623356 437 ntBASIC17.26■□□□□ 0.35
TRIM47Q96LD4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 OR2I1P-209ENST00000641730 5365 ntBASIC17.26■□□□□ 0.35
TRIM47Q96LD4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM47Q96LD4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms