Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AL929302.1-201ENST00000426556 871 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC023141.7-201ENST00000430646 407 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC008026.2-201ENST00000495438 348 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC092862.1-201ENST00000541534 533 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC068831.5-201ENST00000557387 328 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 NDUFB10P1-201ENST00000567319 521 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AL109809.1-201ENST00000418979 1367 ntBASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM43Q96BQ3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 KRT8P2-201ENST00000556193 944 ntBASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 AC090386.2-201ENST00000623010 1039 ntBASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM43Q96BQ3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM43Q96BQ3 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms