Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC024075.2-201ENST00000598112 1473 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SMIM4Q8WVI0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
SMIM4Q8WVI0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
SMIM4Q8WVI0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SMIM4Q8WVI0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.65□□□□□ -0.39
SMIM4Q8WVI0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 PCDHA5-203ENST00000614258 4248 ntBASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 AC015688.4-201ENST00000580780 1647 ntBASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 AC003101.2-201ENST00000612557 442 ntBASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 AL691432.3-201ENST00000621860 400 ntBASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 DLX4-206ENST00000611342 1662 ntBASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SMIM4Q8WVI0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 AL391647.1-201ENST00000395664 511 ntBASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms