Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 MKNK2P1-201ENST00000437526 628 ntBASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AC040169.1-201ENST00000565382 521 ntBASIC12.83□□□□□ -0.36
BEST4Q8NFU0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 MIR193BHG-211ENST00000641433 5365 ntBASIC12.83□□□□□ -0.36
BEST4Q8NFU0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BEST4Q8NFU0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 SAMD11P1-201ENST00000571429 661 ntBASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 BX640515.1-201ENST00000617215 977 ntBASIC12.82□□□□□ -0.36
BEST4Q8NFU0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 AL121723.1-201ENST00000445194 1519 ntBASIC12.82□□□□□ -0.36
BEST4Q8NFU0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms