Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 AL121723.1-201ENST00000445194 1519 ntBASIC11.08□□□□□ -0.64
NUP35Q8NFH5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 KRT8P14-201ENST00000414254 1442 ntBASIC11.08□□□□□ -0.64
NUP35Q8NFH5 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NUP35Q8NFH5 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AP000437.1-201ENST00000624057 2085 ntBASIC11.07□□□□□ -0.64
NUP35Q8NFH5 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AL355306.1-201ENST00000415580 579 ntBASIC11.07□□□□□ -0.64
NUP35Q8NFH5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 RNA5SP415-201ENST00000517246 115 ntBASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 PDPK2P-202ENST00000562415 1191 ntBASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 AC105021.1-202ENST00000570572 669 ntBASIC11.07□□□□□ -0.64
NUP35Q8NFH5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 STRCP1-201ENST00000509801 5328 ntBASIC11.07□□□□□ -0.64
NUP35Q8NFH5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NUP35Q8NFH5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms