Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 BNIP3P13-201ENST00000599968 566 ntBASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AL645939.5-201ENST00000606834 243 ntBASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AL136301.1-201ENST00000615830 422 ntBASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AC023908.3-201ENST00000564211 3047 ntBASIC16.06■□□□□ 0.16
VPS52Q8N1B4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 HINT2P1-201ENST00000419438 481 ntBASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AC011742.3-201ENST00000439053 820 ntBASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 RN7SL163P-201ENST00000583100 276 ntBASIC16.06■□□□□ 0.16
VPS52Q8N1B4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 AC004923.1-202ENST00000642106 209 ntBASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 CICP11-201ENST00000434745 2827 ntBASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS52Q8N1B4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.05■□□□□ 0.16
VPS52Q8N1B4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS52Q8N1B4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms