Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 TP53TG3HP-202ENST00000569755 579 ntBASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 AC126335.2-201ENST00000623362 4637 ntBASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00346Q8IVM7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 TLE1P1-201ENST00000422965 589 ntBASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 TDH-203ENST00000531764 1110 ntBASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 AC145423.3-201ENST00000615987 467 ntBASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 AC134312.5-201ENST00000568031 1313 ntBASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 CICP4-201ENST00000447359 2812 ntBASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
LINC00346Q8IVM7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 AC015688.4-201ENST00000580780 1647 ntBASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 AC020910.5-201ENST00000623668 1865 ntBASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 AC010319.3-201ENST00000597028 470 ntBASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 AC011840.2-201ENST00000563063 1520 ntBASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 AL138725.1-201ENST00000407347 1314 ntBASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 MRPL37P1-201ENST00000592451 1337 ntBASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00346Q8IVM7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms