Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NFRKBQ6P4R8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC007274.2-201ENST00000421675 662 ntBASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC006335.1-201ENST00000445200 547 ntBASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC090164.2-201ENST00000611487 516 ntBASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AL353726.2-201ENST00000623259 884 ntBASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC117489.1-201ENST00000625169 3217 ntBASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
NFRKBQ6P4R8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SPCS2P2-201ENST00000603270 608 ntBASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFRKBQ6P4R8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms