Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 MESTP3-201ENST00000503460 968 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 ACTG1P17-201ENST00000558391 1119 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 AC016629.1-201ENST00000596579 586 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF43Q68DV7 AL157414.3-201ENST00000624276 1954 ntBASIC15.55■□□□□ 0.08
RNF43Q68DV7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF43Q68DV7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 TPM3P8-201ENST00000330554 643 ntBASIC15.54■□□□□ 0.08
RNF43Q68DV7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 BTBD6P1-201ENST00000412176 1267 ntBASIC15.54■□□□□ 0.08
RNF43Q68DV7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 AKR7A2P1-201ENST00000460134 915 ntBASIC15.54■□□□□ 0.08
RNF43Q68DV7 AC026434.2-201ENST00000506094 1078 ntBASIC15.54■□□□□ 0.08
RNF43Q68DV7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.54■□□□□ 0.08
RNF43Q68DV7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 AL359881.3-201ENST00000602640 1721 ntBASIC15.54■□□□□ 0.08
RNF43Q68DV7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF43Q68DV7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF43Q68DV7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AL662890.1-201ENST00000396818 632 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 MIR1202-201ENST00000408529 83 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 CNN2P10-201ENST00000443067 918 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 MPRIPP1-201ENST00000452433 1089 ntBASIC15.53■□□□□ 0.08
RNF43Q68DV7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF43Q68DV7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF43Q68DV7 AC004466.1-201ENST00000599515 1080 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms