Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 URAHP-205ENST00000610227 398 ntBASIC14.05□□□□□ -0.16
RIF1Q5UIP0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIF1Q5UIP0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 AC067931.2-201ENST00000623655 2003 ntBASIC14.04□□□□□ -0.16
RIF1Q5UIP0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 ANKRD26P1-203ENST00000569528 966 ntBASIC14.04□□□□□ -0.16
RIF1Q5UIP0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 KRT18P44-201ENST00000416086 1285 ntBASIC14.04□□□□□ -0.16
RIF1Q5UIP0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 CICP12-201ENST00000455801 843 ntBASIC14.04□□□□□ -0.16
RIF1Q5UIP0 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 DERL2-206ENST00000572834 589 ntTSL 3 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 LINC00244-201ENST00000625073 613 ntBASIC14.04□□□□□ -0.16
RIF1Q5UIP0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIF1Q5UIP0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 RPSAP12-201ENST00000435879 888 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 ALG1L7P-201ENST00000502317 768 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC010491.1-201ENST00000563101 2797 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms