Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 NUS1P3-201ENST00000423502 862 ntBASIC16.33■□□□□ 0.2
TSR1Q2NL82 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 AC125807.1-201ENST00000483097 614 ntBASIC16.33■□□□□ 0.2
TSR1Q2NL82 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 AC093525.8-201ENST00000624099 1342 ntBASIC16.33■□□□□ 0.2
TSR1Q2NL82 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TSR1Q2NL82 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSR1Q2NL82 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 ZNF890P-202ENST00000530367 1156 ntBASIC16.32■□□□□ 0.2
TSR1Q2NL82 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 AC092337.1-201ENST00000568699 1129 ntBASIC16.32■□□□□ 0.2
TSR1Q2NL82 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TSR1Q2NL82 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TSR1Q2NL82 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSR1Q2NL82 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TSR1Q2NL82 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSR1Q2NL82 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TSR1Q2NL82 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.31■□□□□ 0.2
TSR1Q2NL82 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.31■□□□□ 0.2
TSR1Q2NL82 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TSR1Q2NL82 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TSR1Q2NL82 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms