Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC6LQ2NKX8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.7■□□□□ 0.1
ERCC6LQ2NKX8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC6LQ2NKX8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AL590627.1-203ENST00000421194 1026 ntBASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 AC104109.2-201ENST00000602919 1418 ntBASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ERCC6LQ2NKX8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.67■□□□□ 0.1
ERCC6LQ2NKX8 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC6LQ2NKX8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC6LQ2NKX8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ERCC6LQ2NKX8 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms