Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDH1Q08174 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 FAM8A4P-201ENST00000435433 1213 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 BCRP2-202ENST00000447763 634 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDH1Q08174 BCRP6-201ENST00000510112 632 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 BCRP7-201ENST00000511549 544 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PCDH1Q08174 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDH1Q08174 AP000812.2-201ENST00000538934 718 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 KRT90P-201ENST00000549264 1064 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 AC005225.4-201ENST00000557330 545 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 AC106886.1-201ENST00000568660 600 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PCDH1Q08174 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 RN7SL832P-201ENST00000607781 1756 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDH1Q08174 AC136759.1-202ENST00000530858 2194 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCDH1Q08174 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 AC009093.2-202ENST00000620513 2079 ntBASIC14.26□□□□□ -0.13
PCDH1Q08174 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDH1Q08174 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PCDH1Q08174 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDH1Q08174 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDH1Q08174 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 AL136309.1-201ENST00000403917 691 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 AC007551.1-201ENST00000457394 519 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 FTH1P14-201ENST00000482930 551 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 C2orf69P2-201ENST00000562032 1123 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
PCDH1Q08174 ECM1P1-201ENST00000604092 1279 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDH1Q08174 AC027601.5-201ENST00000624065 2482 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDH1Q08174 AC041040.2-201ENST00000622926 2899 ntBASIC14.25□□□□□ -0.13
PCDH1Q08174 AC015688.4-201ENST00000580780 1647 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms