Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP7AQ04656 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP7AQ04656 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATP7AQ04656 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP7AQ04656 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 NAV1-210ENST00000593583 726 ntBASIC21.17■□□□□ 0.98
ATP7AQ04656 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP7AQ04656 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP7AQ04656 ENPP7P8-202ENST00000527856 1345 ntBASIC21.17■□□□□ 0.98
ATP7AQ04656 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP7AQ04656 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP7AQ04656 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP7AQ04656 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP7AQ04656 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP7AQ04656 OR10N1P-201ENST00000392758 869 ntBASIC21.16■□□□□ 0.98
ATP7AQ04656 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP7AQ04656 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP7AQ04656 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC21.16■□□□□ 0.98
ATP7AQ04656 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.16■□□□□ 0.98
ATP7AQ04656 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP7AQ04656 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP7AQ04656 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP7AQ04656 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
ATP7AQ04656 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP7AQ04656 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
ATP7AQ04656 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP7AQ04656 ABCD1P4-201ENST00000399687 604 ntBASIC21.15■□□□□ 0.98
ATP7AQ04656 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATP7AQ04656 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC21.15■□□□□ 0.98
ATP7AQ04656 SEPHS2P1-201ENST00000511618 1162 ntBASIC21.15■□□□□ 0.98
ATP7AQ04656 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP7AQ04656 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP7AQ04656 TYMSP2-201ENST00000589501 424 ntBASIC21.15■□□□□ 0.98
ATP7AQ04656 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 MIR6074-201ENST00000612054 107 ntBASIC21.15■□□□□ 0.98
ATP7AQ04656 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 SHMT1P1-201ENST00000419974 1312 ntBASIC21.15■□□□□ 0.98
ATP7AQ04656 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 AC232323.1-201ENST00000540724 2099 ntBASIC21.15■□□□□ 0.98
ATP7AQ04656 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
ATP7AQ04656 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATP7AQ04656 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
ATP7AQ04656 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP7AQ04656 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP7AQ04656 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
ATP7AQ04656 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP7AQ04656 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATP7AQ04656 AC092570.1-201ENST00000414446 469 ntBASIC21.14■□□□□ 0.98
ATP7AQ04656 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP7AQ04656 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ATP7AQ04656 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.14■□□□□ 0.98
ATP7AQ04656 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC21.14■□□□□ 0.98
ATP7AQ04656 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP7AQ04656 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ATP7AQ04656 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP7AQ04656 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.14■□□□□ 0.98
ATP7AQ04656 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.14■□□□□ 0.98
ATP7AQ04656 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP7AQ04656 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP7AQ04656 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP7AQ04656 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATP7AQ04656 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms