Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.87□□□□□ -0.35
UBA52P62987 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
UBA52P62987 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.87□□□□□ -0.35
UBA52P62987 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.87□□□□□ -0.35
UBA52P62987 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.87□□□□□ -0.35
UBA52P62987 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 KRT223P-202ENST00000449164 1292 ntBASIC12.87□□□□□ -0.35
UBA52P62987 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.87□□□□□ -0.35
UBA52P62987 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 AC104596.2-201ENST00000512793 793 ntBASIC12.87□□□□□ -0.35
UBA52P62987 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.87□□□□□ -0.35
UBA52P62987 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.87□□□□□ -0.35
UBA52P62987 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.87□□□□□ -0.35
UBA52P62987 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 TMEM261P1-201ENST00000604899 340 ntBASIC12.87□□□□□ -0.35
UBA52P62987 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.87□□□□□ -0.35
UBA52P62987 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 COX11-210ENST00000639671 696 ntBASIC12.87□□□□□ -0.35
UBA52P62987 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBA52P62987 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.87□□□□□ -0.35
UBA52P62987 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 AC118758.2-201ENST00000614242 2813 ntBASIC12.86□□□□□ -0.35
UBA52P62987 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 Z82170.1-201ENST00000625081 3192 ntBASIC12.86□□□□□ -0.35
UBA52P62987 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 BOLA2P3-201ENST00000404566 256 ntBASIC12.86□□□□□ -0.35
UBA52P62987 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.86□□□□□ -0.35
UBA52P62987 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 AC015936.2-201ENST00000593177 259 ntBASIC12.86□□□□□ -0.35
UBA52P62987 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBA52P62987 AL033527.5-201ENST00000641382 801 ntBASIC12.86□□□□□ -0.35
UBA52P62987 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 AL139385.1-201ENST00000611744 3272 ntBASIC12.86□□□□□ -0.35
UBA52P62987 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBA52P62987 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.86□□□□□ -0.35
UBA52P62987 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBA52P62987 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBA52P62987 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBA52P62987 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms