Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SNRPFP62306 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SNRPFP62306 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.96■□□□□ 0.15
SNRPFP62306 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SNRPFP62306 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRPFP62306 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.96■□□□□ 0.15
SNRPFP62306 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRPFP62306 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.96■□□□□ 0.15
SNRPFP62306 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRPFP62306 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 FAM86HP-204ENST00000513466 959 ntBASIC15.96■□□□□ 0.15
SNRPFP62306 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.96■□□□□ 0.15
SNRPFP62306 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRPFP62306 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.96■□□□□ 0.15
SNRPFP62306 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.96■□□□□ 0.15
SNRPFP62306 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
SNRPFP62306 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRPFP62306 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRPFP62306 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SNRPFP62306 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRPFP62306 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 POM121L10P-201ENST00000436994 1285 ntBASIC15.95■□□□□ 0.14
SNRPFP62306 GOLGA2P4-201ENST00000441462 777 ntBASIC15.95■□□□□ 0.14
SNRPFP62306 ST13P19-201ENST00000442505 1124 ntBASIC15.95■□□□□ 0.14
SNRPFP62306 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.95■□□□□ 0.14
SNRPFP62306 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.95■□□□□ 0.14
SNRPFP62306 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.95■□□□□ 0.14
SNRPFP62306 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
SNRPFP62306 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
SNRPFP62306 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.95■□□□□ 0.14
SNRPFP62306 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 AC009542.2-202ENST00000619004 1067 ntBASIC15.95■□□□□ 0.14
SNRPFP62306 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 KRT8P29-201ENST00000420409 1371 ntBASIC15.95■□□□□ 0.14
SNRPFP62306 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRPFP62306 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRPFP62306 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRPFP62306 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SNRPFP62306 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.94■□□□□ 0.14
SNRPFP62306 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 GRK6P1-201ENST00000400595 1711 ntBASIC15.94■□□□□ 0.14
SNRPFP62306 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.94■□□□□ 0.14
SNRPFP62306 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SNRPFP62306 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRPFP62306 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms