Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.53□□□□□ -0.4
NKX2-5P52952 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.53□□□□□ -0.4
NKX2-5P52952 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.53□□□□□ -0.4
NKX2-5P52952 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.53□□□□□ -0.4
NKX2-5P52952 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 AC008550.1-201ENST00000511500 884 ntBASIC12.53□□□□□ -0.4
NKX2-5P52952 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.53□□□□□ -0.4
NKX2-5P52952 AL121672.3-201ENST00000608644 468 ntBASIC12.53□□□□□ -0.4
NKX2-5P52952 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.53□□□□□ -0.4
NKX2-5P52952 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NKX2-5P52952 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 AC073439.1-201ENST00000624121 1774 ntBASIC12.53□□□□□ -0.4
NKX2-5P52952 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 LINC02486-201ENST00000604157 3000 ntBASIC12.53□□□□□ -0.4
NKX2-5P52952 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NKX2-5P52952 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NKX2-5P52952 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.53□□□□□ -0.4
NKX2-5P52952 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
NKX2-5P52952 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.52□□□□□ -0.4
NKX2-5P52952 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.52□□□□□ -0.4
NKX2-5P52952 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.52□□□□□ -0.4
NKX2-5P52952 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
NKX2-5P52952 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
NKX2-5P52952 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.52□□□□□ -0.4
NKX2-5P52952 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NKX2-5P52952 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
NKX2-5P52952 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NKX2-5P52952 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX2-5P52952 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.52□□□□□ -0.41
NKX2-5P52952 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.52□□□□□ -0.41
NKX2-5P52952 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.52□□□□□ -0.41
NKX2-5P52952 AL355075.4-201ENST00000554988 638 ntBASIC12.52□□□□□ -0.41
NKX2-5P52952 NAPSB-206ENST00000562112 1266 ntBASIC12.52□□□□□ -0.41
NKX2-5P52952 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.52□□□□□ -0.41
NKX2-5P52952 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.52□□□□□ -0.41
NKX2-5P52952 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 IGHV3-41-201ENST00000613121 348 ntBASIC12.52□□□□□ -0.41
NKX2-5P52952 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NKX2-5P52952 KRT17P2-201ENST00000300992 1314 ntBASIC12.52□□□□□ -0.41
NKX2-5P52952 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 1471.7 ms