Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SMSP52788 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
SMSP52788 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SMSP52788 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMSP52788 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SMSP52788 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SMSP52788 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.93□□□□□ -0.18
SMSP52788 AL137784.3-201ENST00000623858 2288 ntBASIC13.93□□□□□ -0.18
SMSP52788 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.93□□□□□ -0.18
SMSP52788 AC074338.1-201ENST00000416825 156 ntBASIC13.93□□□□□ -0.18
SMSP52788 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.93□□□□□ -0.18
SMSP52788 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.93□□□□□ -0.18
SMSP52788 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
SMSP52788 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.93□□□□□ -0.18
SMSP52788 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.93□□□□□ -0.18
SMSP52788 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.93□□□□□ -0.18
SMSP52788 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.93□□□□□ -0.18
SMSP52788 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 BEND3P1-201ENST00000421591 1944 ntBASIC13.93□□□□□ -0.18
SMSP52788 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SMSP52788 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.93□□□□□ -0.18
SMSP52788 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.93□□□□□ -0.18
SMSP52788 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMSP52788 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SMSP52788 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.92□□□□□ -0.18
SMSP52788 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMSP52788 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.92□□□□□ -0.18
SMSP52788 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
SMSP52788 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SMSP52788 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.92□□□□□ -0.18
SMSP52788 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMSP52788 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 ACKR1-201ENST00000368121 1240 ntBASIC13.92□□□□□ -0.18
SMSP52788 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SMSP52788 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMSP52788 AC093433.1-201ENST00000458048 571 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms