Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLCN2P51788 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CLCN2P51788 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.39□□□□□ -0.11
CLCN2P51788 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.39□□□□□ -0.11
CLCN2P51788 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.39□□□□□ -0.11
CLCN2P51788 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.39□□□□□ -0.11
CLCN2P51788 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.39□□□□□ -0.11
CLCN2P51788 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.39□□□□□ -0.11
CLCN2P51788 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.39□□□□□ -0.11
CLCN2P51788 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 AC016397.2-201ENST00000624848 1985 ntBASIC14.39□□□□□ -0.11
CLCN2P51788 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.39□□□□□ -0.11
CLCN2P51788 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CLCN2P51788 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.39□□□□□ -0.11
CLCN2P51788 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCN2P51788 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CLCN2P51788 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 AC104457.1-201ENST00000401024 814 ntBASIC14.38□□□□□ -0.11
CLCN2P51788 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.38□□□□□ -0.11
CLCN2P51788 ACTG1P3-201ENST00000431775 1114 ntBASIC14.38□□□□□ -0.11
CLCN2P51788 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.38□□□□□ -0.11
CLCN2P51788 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.38□□□□□ -0.11
CLCN2P51788 AC009486.1-201ENST00000569860 813 ntBASIC14.38□□□□□ -0.11
CLCN2P51788 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCN2P51788 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCN2P51788 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 AC018529.2-202ENST00000611482 3087 ntBASIC14.38□□□□□ -0.11
CLCN2P51788 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCN2P51788 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.38□□□□□ -0.11
CLCN2P51788 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 AC005562.1-201ENST00000583030 3219 ntBASIC14.37□□□□□ -0.11
CLCN2P51788 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCN2P51788 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLCN2P51788 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms