Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SOX2P48431 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.08□□□□□ -0.32
SOX2P48431 CICP8-201ENST00000455800 2813 ntBASIC13.08□□□□□ -0.32
SOX2P48431 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SOX2P48431 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SOX2P48431 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.08□□□□□ -0.32
SOX2P48431 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.08□□□□□ -0.32
SOX2P48431 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SOX2P48431 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.08□□□□□ -0.32
SOX2P48431 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.08□□□□□ -0.32
SOX2P48431 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 PCDHA5-203ENST00000614258 4248 ntBASIC13.07□□□□□ -0.32
SOX2P48431 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SOX2P48431 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
SOX2P48431 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 TSEN15P1-201ENST00000423257 515 ntBASIC13.07□□□□□ -0.32
SOX2P48431 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 AL589987.1-201ENST00000453380 819 ntBASIC13.07□□□□□ -0.32
SOX2P48431 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.07□□□□□ -0.32
SOX2P48431 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.07□□□□□ -0.32
SOX2P48431 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SOX2P48431 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SOX2P48431 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
SOX2P48431 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SOX2P48431 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SOX2P48431 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SOX2P48431 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.06□□□□□ -0.32
SOX2P48431 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.06□□□□□ -0.32
SOX2P48431 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SOX2P48431 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SOX2P48431 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms