Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
HMGCLP35914 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 AC244394.1-201ENST00000435000 1665 ntBASIC14.66□□□□□ -0.06
HMGCLP35914 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HMGCLP35914 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCLP35914 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCLP35914 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCLP35914 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
HMGCLP35914 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 AC027237.1-201ENST00000560942 655 ntBASIC14.66□□□□□ -0.06
HMGCLP35914 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCLP35914 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 MIR6720-201ENST00000611664 98 ntBASIC14.66□□□□□ -0.06
HMGCLP35914 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.65□□□□□ -0.06
HMGCLP35914 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HMGCLP35914 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HMGCLP35914 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 MIR663B-201ENST00000408361 115 ntBASIC14.65□□□□□ -0.06
HMGCLP35914 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCLP35914 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCLP35914 AL157407.1-201ENST00000435784 904 ntBASIC14.65□□□□□ -0.06
HMGCLP35914 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.65□□□□□ -0.06
HMGCLP35914 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 AC100827.2-201ENST00000563214 1194 ntBASIC14.65□□□□□ -0.06
HMGCLP35914 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.65□□□□□ -0.06
HMGCLP35914 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.65□□□□□ -0.06
HMGCLP35914 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.65□□□□□ -0.06
HMGCLP35914 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.65□□□□□ -0.06
HMGCLP35914 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 RN7SL832P-201ENST00000607781 1756 ntBASIC14.65□□□□□ -0.06
HMGCLP35914 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCLP35914 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCLP35914 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCLP35914 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
HMGCLP35914 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
HMGCLP35914 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
HMGCLP35914 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 AC005089.1-201ENST00000619486 2241 ntBASIC14.64□□□□□ -0.07
HMGCLP35914 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms