Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 AL137784.3-201ENST00000623858 2288 ntBASIC13.61□□□□□ -0.23
SHC1P29353 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.61□□□□□ -0.23
SHC1P29353 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SHC1P29353 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHC1P29353 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.6□□□□□ -0.23
SHC1P29353 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.6□□□□□ -0.23
SHC1P29353 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.6□□□□□ -0.23
SHC1P29353 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 AC016694.1-201ENST00000434179 700 ntBASIC13.6□□□□□ -0.23
SHC1P29353 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 FO681548.1-201ENST00000455617 1132 ntBASIC13.6□□□□□ -0.23
SHC1P29353 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.6□□□□□ -0.23
SHC1P29353 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.6□□□□□ -0.23
SHC1P29353 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.6□□□□□ -0.23
SHC1P29353 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SHC1P29353 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.6□□□□□ -0.23
SHC1P29353 AC092135.3-201ENST00000624151 1846 ntBASIC13.6□□□□□ -0.23
SHC1P29353 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHC1P29353 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHC1P29353 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 AC018442.1-201ENST00000421439 2061 ntBASIC13.59□□□□□ -0.23
SHC1P29353 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHC1P29353 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHC1P29353 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SHC1P29353 POM121L8P-201ENST00000417732 1281 ntBASIC13.59□□□□□ -0.23
SHC1P29353 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 C2orf27AP3-201ENST00000434123 579 ntBASIC13.59□□□□□ -0.23
SHC1P29353 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 AC234783.1-201ENST00000441761 496 ntBASIC13.59□□□□□ -0.23
SHC1P29353 POM121L9P-203ENST00000441984 1285 ntBASIC13.59□□□□□ -0.23
SHC1P29353 GPR53P-205ENST00000457298 1084 ntBASIC13.59□□□□□ -0.23
SHC1P29353 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SHC1P29353 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.59□□□□□ -0.23
SHC1P29353 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms