Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 AC092053.3-201ENST00000641308 4975 ntBASIC13.39□□□□□ -0.27
GDF1P27539 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 AC004899.1-201ENST00000424687 1714 ntBASIC13.39□□□□□ -0.27
GDF1P27539 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 FNTAP2-201ENST00000430308 634 ntBASIC13.39□□□□□ -0.27
GDF1P27539 NKAIN1P1-201ENST00000435754 582 ntBASIC13.39□□□□□ -0.27
GDF1P27539 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.39□□□□□ -0.27
GDF1P27539 AC012441.2-201ENST00000444843 739 ntBASIC13.39□□□□□ -0.27
GDF1P27539 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 AKR7A2P1-201ENST00000460134 915 ntBASIC13.39□□□□□ -0.27
GDF1P27539 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.39□□□□□ -0.27
GDF1P27539 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
GDF1P27539 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
GDF1P27539 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.39□□□□□ -0.27
GDF1P27539 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 MIR4783-201ENST00000580343 82 ntBASIC13.39□□□□□ -0.27
GDF1P27539 RN7SL163P-201ENST00000583100 276 ntBASIC13.39□□□□□ -0.27
GDF1P27539 BNIP3P13-201ENST00000599968 566 ntBASIC13.39□□□□□ -0.27
GDF1P27539 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.39□□□□□ -0.27
GDF1P27539 AC009884.2-201ENST00000603110 324 ntBASIC13.39□□□□□ -0.27
GDF1P27539 MIR6720-201ENST00000611664 98 ntBASIC13.39□□□□□ -0.27
GDF1P27539 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.39□□□□□ -0.27
GDF1P27539 AL136295.7-201ENST00000619226 1200 ntBASIC13.39□□□□□ -0.27
GDF1P27539 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 AC018442.1-201ENST00000421439 2061 ntBASIC13.39□□□□□ -0.27
GDF1P27539 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
GDF1P27539 AC068418.2-201ENST00000577309 3703 ntBASIC13.39□□□□□ -0.27
GDF1P27539 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GDF1P27539 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 AL008718.2-201ENST00000609206 1313 ntBASIC13.39□□□□□ -0.27
GDF1P27539 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GDF1P27539 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GDF1P27539 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.38□□□□□ -0.27
GDF1P27539 AC013355.1-201ENST00000562625 723 ntBASIC13.38□□□□□ -0.27
GDF1P27539 AC008805.1-201ENST00000590892 364 ntBASIC13.38□□□□□ -0.27
GDF1P27539 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.38□□□□□ -0.27
GDF1P27539 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 AC022748.3-201ENST00000621828 275 ntBASIC13.38□□□□□ -0.27
GDF1P27539 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.38□□□□□ -0.27
GDF1P27539 AC004923.1-202ENST00000642106 209 ntBASIC13.38□□□□□ -0.27
GDF1P27539 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDF1P27539 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms