Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.04□□□□□ -0.16
MMP11P24347 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.04□□□□□ -0.16
MMP11P24347 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.04□□□□□ -0.16
MMP11P24347 CALR4P-201ENST00000431943 946 ntBASIC14.04□□□□□ -0.16
MMP11P24347 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.04□□□□□ -0.16
MMP11P24347 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.04□□□□□ -0.16
MMP11P24347 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.04□□□□□ -0.16
MMP11P24347 AC007663.3-201ENST00000609632 465 ntBASIC14.04□□□□□ -0.16
MMP11P24347 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.04□□□□□ -0.16
MMP11P24347 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
MMP11P24347 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 AC138028.6-201ENST00000616106 1482 ntBASIC14.04□□□□□ -0.16
MMP11P24347 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
MMP11P24347 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.04□□□□□ -0.16
MMP11P24347 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MMP11P24347 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.03□□□□□ -0.16
MMP11P24347 AP001267.2-201ENST00000532619 2086 ntBASIC14.03□□□□□ -0.16
MMP11P24347 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.03□□□□□ -0.16
MMP11P24347 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.03□□□□□ -0.16
MMP11P24347 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 AKR7A2P1-201ENST00000460134 915 ntBASIC14.03□□□□□ -0.16
MMP11P24347 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.03□□□□□ -0.16
MMP11P24347 AC100850.1-201ENST00000506768 649 ntBASIC14.03□□□□□ -0.16
MMP11P24347 SCARNA20.5-201ENST00000516991 142 ntBASIC14.03□□□□□ -0.16
MMP11P24347 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.03□□□□□ -0.16
MMP11P24347 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 AC020914.3-201ENST00000594712 304 ntBASIC14.03□□□□□ -0.16
MMP11P24347 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
MMP11P24347 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 AC018735.1-201ENST00000437208 1502 ntBASIC14.03□□□□□ -0.16
MMP11P24347 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.03□□□□□ -0.16
MMP11P24347 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.03□□□□□ -0.16
MMP11P24347 OR2I1P-209ENST00000641730 5365 ntBASIC14.03□□□□□ -0.16
MMP11P24347 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
MMP11P24347 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.03□□□□□ -0.16
MMP11P24347 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.03□□□□□ -0.16
MMP11P24347 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MMP11P24347 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MMP11P24347 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
MMP11P24347 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
MMP11P24347 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.02□□□□□ -0.16
MMP11P24347 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms