Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC099336.1-201ENST00000417053 1171 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 AL391280.1-201ENST00000506969 1062 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 RNA5SP412-201ENST00000516234 123 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.7□□□□□ -0.38
TNFSF4P23510 AC004466.1-201ENST00000599515 1080 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 AC138696.2-201ENST00000607376 223 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TNFSF4P23510 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.69□□□□□ -0.38
TNFSF4P23510 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.69□□□□□ -0.38
TNFSF4P23510 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.69□□□□□ -0.38
TNFSF4P23510 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 DUX4L45-201ENST00000566406 1057 ntBASIC12.69□□□□□ -0.38
TNFSF4P23510 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 PPY2P-201ENST00000582808 702 ntBASIC12.69□□□□□ -0.38
TNFSF4P23510 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.69□□□□□ -0.38
TNFSF4P23510 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 AC003102.2-201ENST00000589195 1469 ntBASIC12.69□□□□□ -0.38
TNFSF4P23510 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TNFSF4P23510 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TNFSF4P23510 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.69□□□□□ -0.38
TNFSF4P23510 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms