Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 AC084364.1-201ENST00000551967 1556 ntBASIC13.84□□□□□ -0.19
NR4A1P22736 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
NR4A1P22736 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 FO393414.2-201ENST00000405153 598 ntBASIC13.84□□□□□ -0.19
NR4A1P22736 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.84□□□□□ -0.19
NR4A1P22736 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.84□□□□□ -0.19
NR4A1P22736 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.84□□□□□ -0.19
NR4A1P22736 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.84□□□□□ -0.19
NR4A1P22736 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR4A1P22736 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.84□□□□□ -0.19
NR4A1P22736 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
NR4A1P22736 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.83□□□□□ -0.19
NR4A1P22736 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NR4A1P22736 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.83□□□□□ -0.19
NR4A1P22736 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.83□□□□□ -0.19
NR4A1P22736 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NR4A1P22736 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.83□□□□□ -0.19
NR4A1P22736 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
NR4A1P22736 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
NR4A1P22736 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.83□□□□□ -0.2
NR4A1P22736 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 AC015909.5-201ENST00000624336 2266 ntBASIC13.83□□□□□ -0.2
NR4A1P22736 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.83□□□□□ -0.2
NR4A1P22736 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.83□□□□□ -0.2
NR4A1P22736 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.83□□□□□ -0.2
NR4A1P22736 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.83□□□□□ -0.2
NR4A1P22736 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.83□□□□□ -0.2
NR4A1P22736 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.83□□□□□ -0.2
NR4A1P22736 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.83□□□□□ -0.2
NR4A1P22736 MIR6069-201ENST00000620069 79 ntBASIC13.83□□□□□ -0.2
NR4A1P22736 AL033527.5-202ENST00000641632 1098 ntBASIC13.83□□□□□ -0.2
NR4A1P22736 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NR4A1P22736 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NR4A1P22736 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 AC020658.7-201ENST00000624274 2442 ntBASIC13.83□□□□□ -0.2
NR4A1P22736 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 AC055811.4-201ENST00000624039 1754 ntBASIC13.83□□□□□ -0.2
NR4A1P22736 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR4A1P22736 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NR4A1P22736 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 AC004241.5-201ENST00000623870 2448 ntBASIC13.82□□□□□ -0.2
NR4A1P22736 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms