Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH3P22223 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CDH3P22223 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 AC126365.1-201ENST00000578585 1514 ntBASIC14.59□□□□□ -0.07
CDH3P22223 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CDH3P22223 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDH3P22223 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH3P22223 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH3P22223 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.58□□□□□ -0.07
CDH3P22223 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CDH3P22223 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH3P22223 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CDH3P22223 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CDH3P22223 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CDH3P22223 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH3P22223 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH3P22223 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH3P22223 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH3P22223 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH3P22223 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH3P22223 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH3P22223 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDH3P22223 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH3P22223 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH3P22223 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH3P22223 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH3P22223 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.58□□□□□ -0.08
CDH3P22223 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH3P22223 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH3P22223 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 KRT8P44-201ENST00000441609 1350 ntBASIC14.58□□□□□ -0.08
CDH3P22223 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH3P22223 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH3P22223 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH3P22223 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CDH3P22223 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH3P22223 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 REXO1L6P-201ENST00000603433 1515 ntBASIC14.57□□□□□ -0.08
CDH3P22223 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.57□□□□□ -0.08
CDH3P22223 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDH3P22223 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDH3P22223 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 BRWD1P1-201ENST00000401091 371 ntBASIC14.57□□□□□ -0.08
CDH3P22223 CD8B2-202ENST00000417670 633 ntBASIC14.57□□□□□ -0.08
CDH3P22223 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH3P22223 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH3P22223 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH3P22223 AL583810.1-201ENST00000553344 1045 ntBASIC14.57□□□□□ -0.08
CDH3P22223 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH3P22223 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms