Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.89■□□□□ 0.13
CD58P19256 HOMER2P2-201ENST00000451621 847 ntBASIC15.89■□□□□ 0.13
CD58P19256 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.89■□□□□ 0.13
CD58P19256 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CD58P19256 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD58P19256 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.88■□□□□ 0.13
CD58P19256 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.88■□□□□ 0.13
CD58P19256 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD58P19256 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 YBX1P6-201ENST00000442962 1002 ntBASIC15.88■□□□□ 0.13
CD58P19256 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.88■□□□□ 0.13
CD58P19256 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CD58P19256 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.88■□□□□ 0.13
CD58P19256 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.88■□□□□ 0.13
CD58P19256 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CD58P19256 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.88■□□□□ 0.13
CD58P19256 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD58P19256 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CD58P19256 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.87■□□□□ 0.13
CD58P19256 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.87■□□□□ 0.13
CD58P19256 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CD58P19256 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.87■□□□□ 0.13
CD58P19256 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.87■□□□□ 0.13
CD58P19256 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 AL008721.1-201ENST00000609964 604 ntBASIC15.87■□□□□ 0.13
CD58P19256 ZACNP1-201ENST00000612259 710 ntBASIC15.87■□□□□ 0.13
CD58P19256 AC009542.2-202ENST00000619004 1067 ntBASIC15.87■□□□□ 0.13
CD58P19256 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.87■□□□□ 0.13
CD58P19256 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
CD58P19256 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 LINC01230-201ENST00000625222 3017 ntBASIC15.87■□□□□ 0.13
CD58P19256 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD58P19256 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.87■□□□□ 0.13
CD58P19256 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms