Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ATF3P18847 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 OR52M2P-201ENST00000414298 959 ntBASIC19.85■□□□□ 0.77
ATF3P18847 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.85■□□□□ 0.77
ATF3P18847 CHCHD2P2-201ENST00000503744 321 ntBASIC19.85■□□□□ 0.77
ATF3P18847 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.85■□□□□ 0.77
ATF3P18847 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC19.85■□□□□ 0.77
ATF3P18847 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 AC023968.2-201ENST00000560593 1049 ntBASIC19.85■□□□□ 0.77
ATF3P18847 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.85■□□□□ 0.77
ATF3P18847 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ATF3P18847 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 AC023024.2-201ENST00000623561 1993 ntBASIC19.84■□□□□ 0.77
ATF3P18847 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 WASH7P-201ENST00000488147 1351 ntBASIC19.84■□□□□ 0.77
ATF3P18847 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ATF3P18847 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC19.84■□□□□ 0.77
ATF3P18847 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.84■□□□□ 0.77
ATF3P18847 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ATF3P18847 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.84■□□□□ 0.77
ATF3P18847 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 HNRNPA1P16-201ENST00000575692 955 ntBASIC19.84■□□□□ 0.77
ATF3P18847 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC19.84■□□□□ 0.77
ATF3P18847 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.84■□□□□ 0.77
ATF3P18847 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF3P18847 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.84■□□□□ 0.77
ATF3P18847 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 AC019109.1-201ENST00000401725 1874 ntBASIC19.84■□□□□ 0.77
ATF3P18847 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF3P18847 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
ATF3P18847 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
ATF3P18847 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATF3P18847 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.83■□□□□ 0.77
ATF3P18847 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
ATF3P18847 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.83■□□□□ 0.77
ATF3P18847 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.83■□□□□ 0.77
ATF3P18847 LINC00265-2P-201ENST00000413372 782 ntBASIC19.83■□□□□ 0.77
ATF3P18847 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC19.83■□□□□ 0.77
ATF3P18847 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC19.83■□□□□ 0.77
ATF3P18847 RN7SL788P-201ENST00000460504 316 ntBASIC19.83■□□□□ 0.77
ATF3P18847 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.83■□□□□ 0.77
ATF3P18847 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF3P18847 KLF17P1-201ENST00000547105 1126 ntBASIC19.83■□□□□ 0.77
ATF3P18847 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms