Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN2P17655 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN2P17655 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 AC148477.4-201ENST00000613430 1793 ntBASIC17.1■□□□□ 0.33
CAPN2P17655 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CAPN2P17655 ACTG1P2-201ENST00000415776 1125 ntBASIC17.1■□□□□ 0.33
CAPN2P17655 POM121L8P-201ENST00000417732 1281 ntBASIC17.1■□□□□ 0.33
CAPN2P17655 ACTG1P11-201ENST00000425411 1125 ntBASIC17.1■□□□□ 0.33
CAPN2P17655 POM121L9P-203ENST00000441984 1285 ntBASIC17.1■□□□□ 0.33
CAPN2P17655 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.1■□□□□ 0.33
CAPN2P17655 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN2P17655 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 OR10B1P-201ENST00000601666 907 ntBASIC17.1■□□□□ 0.33
CAPN2P17655 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CAPN2P17655 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN2P17655 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN2P17655 AL109954.1-202ENST00000564051 2148 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 AC136621.1-201ENST00000624017 2304 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CAPN2P17655 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.09■□□□□ 0.33
CAPN2P17655 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.09■□□□□ 0.33
CAPN2P17655 RPL18P13-201ENST00000478088 569 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 POU5F1P2-201ENST00000521750 823 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.09■□□□□ 0.33
CAPN2P17655 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 AC135983.4-201ENST00000564116 1262 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN2P17655 AC005357.2-202ENST00000590507 1060 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.09■□□□□ 0.33
CAPN2P17655 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN2P17655 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN2P17655 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 AC112504.1-201ENST00000623415 1841 ntBASIC17.09■□□□□ 0.33
CAPN2P17655 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.09■□□□□ 0.33
CAPN2P17655 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN2P17655 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CAPN2P17655 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN2P17655 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN2P17655 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CAPN2P17655 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN2P17655 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN2P17655 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPN2P17655 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CAPN2P17655 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.08■□□□□ 0.33
CAPN2P17655 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms