Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCL3L1P16619 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCL3L1P16619 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCL3L1P16619 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL3L1P16619 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 FAM21FP-201ENST00000426241 1131 ntBASIC12.21□□□□□ -0.45
CCL3L1P16619 AL355994.2-201ENST00000447882 704 ntBASIC12.21□□□□□ -0.45
CCL3L1P16619 HIST2H2BB-201ENST00000449108 381 ntBASIC12.21□□□□□ -0.45
CCL3L1P16619 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL3L1P16619 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL3L1P16619 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL3L1P16619 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL3L1P16619 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 AL358472.3-201ENST00000608147 415 ntBASIC12.21□□□□□ -0.45
CCL3L1P16619 AL008721.1-201ENST00000609964 604 ntBASIC12.21□□□□□ -0.45
CCL3L1P16619 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL3L1P16619 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL3L1P16619 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CCL3L1P16619 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.21□□□□□ -0.46
CCL3L1P16619 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCL3L1P16619 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL3L1P16619 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
CCL3L1P16619 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.21□□□□□ -0.46
CCL3L1P16619 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL3L1P16619 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL3L1P16619 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL3L1P16619 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 AC015688.4-201ENST00000580780 1647 ntBASIC12.2□□□□□ -0.46
CCL3L1P16619 AC099063.4-201ENST00000641099 1602 ntBASIC12.2□□□□□ -0.46
CCL3L1P16619 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL3L1P16619 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL3L1P16619 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 CHMP1AP1-201ENST00000445563 662 ntBASIC12.2□□□□□ -0.46
CCL3L1P16619 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL3L1P16619 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
CCL3L1P16619 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL3L1P16619 AC010328.2-201ENST00000597698 1111 ntBASIC12.2□□□□□ -0.46
CCL3L1P16619 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 AL136301.1-201ENST00000615830 422 ntBASIC12.2□□□□□ -0.46
CCL3L1P16619 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 AC023908.3-201ENST00000564211 3047 ntBASIC12.2□□□□□ -0.46
CCL3L1P16619 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL3L1P16619 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCL3L1P16619 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms