Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC016694.1-201ENST00000434179 700 ntBASIC14.46□□□□□ -0.09
CDH1P12830 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 CROCCP4-201ENST00000457096 498 ntBASIC14.46□□□□□ -0.09
CDH1P12830 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH1P12830 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.46□□□□□ -0.09
CDH1P12830 SALL4P5-201ENST00000419001 1760 ntBASIC14.46□□□□□ -0.09
CDH1P12830 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDH1P12830 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH1P12830 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH1P12830 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH1P12830 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH1P12830 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH1P12830 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH1P12830 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
CDH1P12830 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 FAM197Y7-201ENST00000432892 766 ntBASIC14.45□□□□□ -0.1
CDH1P12830 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 AC007551.1-201ENST00000457394 519 ntBASIC14.45□□□□□ -0.1
CDH1P12830 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CDH1P12830 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDH1P12830 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 AC132938.4-201ENST00000623835 848 ntBASIC14.45□□□□□ -0.1
CDH1P12830 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH1P12830 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH1P12830 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH1P12830 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 AC003102.2-201ENST00000589195 1469 ntBASIC14.44□□□□□ -0.1
CDH1P12830 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDH1P12830 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 ST20-AS1-201ENST00000560255 4223 ntBASIC14.44□□□□□ -0.1
CDH1P12830 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH1P12830 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH1P12830 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms