Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COL11A1P12107 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.34■□□□□ 0.21
COL11A1P12107 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL11A1P12107 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COL11A1P12107 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL11A1P12107 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL11A1P12107 AC025183.3-201ENST00000623526 1482 ntBASIC16.34■□□□□ 0.21
COL11A1P12107 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL11A1P12107 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.33■□□□□ 0.21
COL11A1P12107 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.33■□□□□ 0.21
COL11A1P12107 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.33■□□□□ 0.21
COL11A1P12107 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.33■□□□□ 0.21
COL11A1P12107 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.33■□□□□ 0.21
COL11A1P12107 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
COL11A1P12107 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
COL11A1P12107 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.33■□□□□ 0.21
COL11A1P12107 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.33■□□□□ 0.21
COL11A1P12107 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
COL11A1P12107 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
COL11A1P12107 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL11A1P12107 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.33■□□□□ 0.2
COL11A1P12107 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.33■□□□□ 0.2
COL11A1P12107 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 Z69890.1-201ENST00000382990 339 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.33■□□□□ 0.2
COL11A1P12107 AL139008.1-201ENST00000437894 228 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.33■□□□□ 0.2
COL11A1P12107 PGAM1P12-201ENST00000505622 748 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.33■□□□□ 0.2
COL11A1P12107 OR5BD1P-201ENST00000532527 817 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 AC023824.1-201ENST00000562945 2975 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.33■□□□□ 0.2
COL11A1P12107 AL118522.1-201ENST00000611368 560 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 AC009084.3-201ENST00000623356 437 ntBASIC16.33■□□□□ 0.2
COL11A1P12107 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.33■□□□□ 0.2
COL11A1P12107 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL11A1P12107 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL11A1P12107 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 CICP24-201ENST00000605464 2705 ntBASIC16.32■□□□□ 0.2
COL11A1P12107 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COL11A1P12107 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.32■□□□□ 0.2
COL11A1P12107 AC140113.1-201ENST00000603467 169 ntBASIC16.32■□□□□ 0.2
COL11A1P12107 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COL11A1P12107 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
COL11A1P12107 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.32■□□□□ 0.2
COL11A1P12107 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL11A1P12107 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.31■□□□□ 0.2
COL11A1P12107 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.31■□□□□ 0.2
COL11A1P12107 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL11A1P12107 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms