Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LAMC1P11047 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC20.34■□□□□ 0.85
LAMC1P11047 HLA-DMA-203ENST00000395305 777 ntBASIC20.34■□□□□ 0.85
LAMC1P11047 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.34■□□□□ 0.85
LAMC1P11047 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.34■□□□□ 0.85
LAMC1P11047 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMC1P11047 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LAMC1P11047 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.34■□□□□ 0.85
LAMC1P11047 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LAMC1P11047 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMC1P11047 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LAMC1P11047 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMC1P11047 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC20.33■□□□□ 0.85
LAMC1P11047 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LAMC1P11047 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LAMC1P11047 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMC1P11047 CCT8L1P-201ENST00000465400 1674 ntBASIC20.33■□□□□ 0.85
LAMC1P11047 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.33■□□□□ 0.85
LAMC1P11047 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 USP17L6P-201ENST00000382470 1197 ntBASIC20.33■□□□□ 0.84
LAMC1P11047 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.33■□□□□ 0.84
LAMC1P11047 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.33■□□□□ 0.84
LAMC1P11047 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.33■□□□□ 0.84
LAMC1P11047 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.33■□□□□ 0.84
LAMC1P11047 CMC2-204ENST00000562713 573 ntTSL 3 BASIC20.33■□□□□ 0.84
LAMC1P11047 CMC2-209ENST00000565108 399 ntTSL 2 BASIC20.33■□□□□ 0.84
LAMC1P11047 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.33■□□□□ 0.84
LAMC1P11047 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.33■□□□□ 0.84
LAMC1P11047 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.33■□□□□ 0.84
LAMC1P11047 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LAMC1P11047 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
LAMC1P11047 TPO-203ENST00000346956 2923 ntTSL 5 BASIC20.33■□□□□ 0.84
LAMC1P11047 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LAMC1P11047 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LAMC1P11047 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.32■□□□□ 0.84
LAMC1P11047 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC20.32■□□□□ 0.84
LAMC1P11047 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LAMC1P11047 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.32■□□□□ 0.84
LAMC1P11047 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.32■□□□□ 0.84
LAMC1P11047 AC007952.4-201ENST00000573866 637 ntBASIC20.32■□□□□ 0.84
LAMC1P11047 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.32■□□□□ 0.84
LAMC1P11047 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.32■□□□□ 0.84
LAMC1P11047 AP001184.1-201ENST00000637936 376 ntBASIC20.32■□□□□ 0.84
LAMC1P11047 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 ADK-205ENST00000539909 1866 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LAMC1P11047 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LAMC1P11047 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMC1P11047 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.31■□□□□ 0.84
LAMC1P11047 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.31■□□□□ 0.84
LAMC1P11047 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 LINC00634-202ENST00000505157 222 ntBASIC20.31■□□□□ 0.84
LAMC1P11047 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC20.31■□□□□ 0.84
LAMC1P11047 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.31■□□□□ 0.84
LAMC1P11047 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.31■□□□□ 0.84
LAMC1P11047 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMC1P11047 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.31■□□□□ 0.84
LAMC1P11047 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms